Merge branch 'machine_learning' of git.suuppl.dev:seppl/optical-regeneration into machine_learning

update submodule configuration and enhance model settings; add eye diagram functionality
move sliced dataset testing script
2024-12-02 18:51:30 +01:00 · 2024-12-02 18:50:43 +01:00 · 2024-12-02 18:50:13 +01:00 · 2024-12-02 18:49:38 +01:00 · 2024-12-02 18:49:14 +01:00 · 2024-12-02 18:48:43 +01:00
210 changed files with 4907 additions and 73 deletions
--- a/.gitattributes
+++ b/.gitattributes
@@ -1,4 +1,5 @@
 data/**/* filter=lfs diff=lfs merge=lfs -text
+data/*.db filter=lfs diff=lfs merge=lfs -text
 data/*.ini filter=lfs diff=lfs merge=lfs text

 ## lfs setup
--- a/.gitignore
+++ b/.gitignore
@@ -1,7 +1,5 @@
 src/**/*.ini
-
-# VSCode
-.vscode
+.*

 # Byte-compiled / optimized / DLL files
 __pycache__/
--- a/.gitmodules
+++ b/.gitmodules
@@ -1,3 +1,4 @@
 [submodule "pypho"]
 	path = pypho
 	url = git@gitlab.lrz.de:000000003B9B3E61/pypho.git
+	branch = main
--- a/1
+++ b/1
@@ -10,6 +10,7 @@ use is covered by a right of the copyright holder of the Work).
 The Work is provided under the terms of this Licence when the Licensor (as
 defined below) has placed the following notice immediately following the
 copyright notice for the Work:
+
 ```raw
 Licensed under the EUPL
 ```
--- a/README.md
+++ b/README.md
@@ -13,7 +13,7 @@ Full license text in LICENSE file

 # optical-regeneration

-## Notes on cloning:
+## Notes on cloning

 - `pypho` is added as a submodule -> `--recurse-submodules`
 - This repo has about 7.5GB of datasets in it. The `git lfs fetch` step will take a while.
@@ -29,4 +29,5 @@ git lfs checkout
 ```

 ## License
+
 This project is licensed under EUPL-1.2.
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+++ b/Show More
Author	SHA1	Message	Date
Joseph Hopfmüller	a8a1c49c00	Merge branch 'machine_learning' of git.suuppl.dev:seppl/optical-regeneration into machine_learning	2024-12-02 18:51:30 +01:00
Joseph Hopfmüller	297e9e8d7f	update submodule configuration and enhance model settings; add eye diagram functionality	2024-12-02 18:50:43 +01:00
Joseph Hopfmüller	aa2e7a4cb4	move sliced dataset testing script	2024-12-02 18:50:13 +01:00
Joseph Hopfmüller	1dcefecf59	update signal generation patterns in generate_signal.py	2024-12-02 18:49:38 +01:00
Joseph Hopfmüller	a5f2f49360	enhance data loading and processing in FiberRegenerationDataset; add timestamps and support for multiple file paths	2024-12-02 18:49:14 +01:00
Joseph Hopfmüller	e20aa9bfb1	add eye_diagram analysis	2024-12-02 18:48:43 +01:00
Joseph Hopfmüller	010889af13	generate training data with finer length steps	2024-12-02 18:45:10 +01:00
Joseph Hopfmüller	c145d58df8	update subproject reference to latest commit	2024-11-29 15:53:08 +01:00
Joseph Hopfmüller	487288c923	define new activation functions and parametrizations	2024-11-29 15:51:25 +01:00
Joseph Hopfmüller	bdf6f5bfb8	clean up regen_no_hyper.py	2024-11-29 15:50:34 +01:00
Joseph Hopfmüller	e02662ed4f	new optuna studies	2024-11-29 15:49:59 +01:00
Joseph Hopfmüller	fd7a0b9c31	using latest knowledge for hyperparameter search	2024-11-29 15:49:46 +01:00
Joseph Hopfmüller	ff32aefd52	minor fixes and changes	2024-11-29 15:49:10 +01:00
Joseph Hopfmüller	b156b9ceaf	refactor hypertraining.py to improve model layer handling and response plotting; adjust data settings for batch processing	2024-11-29 15:48:27 +01:00
Joseph Hopfmüller	cfa08aae4e	add training.py for defining and running models without hyperparametertuning	2024-11-29 15:48:18 +01:00
Joseph Hopfmüller	0422c81f3b	update single_core_regen settings new runs	2024-11-24 01:56:01 +01:00
Joseph Hopfmüller	7343ccb3a5	refactor complex loss functions for improved readability; update settings and dataset classes for consistency	2024-11-24 01:55:32 +01:00
Joseph Hopfmüller	9a16a5637d	add optional parameter suggestion methods for Optuna trials	2024-11-24 01:55:12 +01:00
Joseph Hopfmüller	80e9a3379e	add autosampler support	2024-11-20 23:10:14 +01:00
Joseph Hopfmüller	8d4d0468bd	complexhalf (complex32) isn't supported by torch.linalg.qr	2024-11-20 22:56:26 +01:00
Joseph Hopfmüller	6358c95c42	new hyperparameter db	2024-11-20 22:49:40 +01:00
Joseph Hopfmüller	674033ac2e	move hypertraining class into separate file; move settings dataclasses into separate file; add SemiUnitaryLayer; clean up model response plotting code; cnt hyperparameter search	2024-11-20 22:49:31 +01:00
Joseph Hopfmüller	cdca5de473	training loop speedup	2024-11-20 11:29:18 +01:00
Joseph Hopfmüller	1622c38582	refactor: remove unused Optuna visualization utility	2024-11-17 22:23:37 +01:00
Joseph Hopfmüller	2bba760378	add: implement Optuna visualization utility with Dash	2024-11-17 22:23:01 +01:00
Joseph Hopfmüller	9ec548757d	add: regen.py (main hyperparameter training file) feat: add utility functions for fiber dataset visualization and hyperparameter training; housekeeping: rename dataset.py -> datasets.py	2024-11-17 22:22:37 +01:00
Joseph Hopfmüller	05a3ee9394	refactor: clean up .gitignore, remove unused scripts	2024-11-17 22:18:44 +01:00
Joseph Hopfmüller	086240489a	minor edits on notes	2024-11-17 22:16:52 +01:00
Joseph Hopfmüller	87f40fc37c	add SlicedDataset class and utility scripts; refactor: remove _path_fix.py and update imports;	2024-11-17 01:04:33 +01:00
Joseph Hopfmüller	90aa6dbaf8	housekeeping	2024-11-17 01:04:14 +01:00
Joseph Hopfmüller	744c5f5166	rename dir; add torch import test script	2024-11-16 00:39:19 +01:00